PubSqueezer



Selected Analyses
* Rare disease



Squeeze out key ideas from 2k PubMed articles of your choice
Instruction | Data Science Tips

The information given are not medical advice.
For general health or symptomatology questions,
always consult a medical doctor.

Due to the limited computational resources currently availalbe,
please acknowledge you searched in "Selected Analyses" and "Analysed by Users"
before submitting a new request


analysis requests in the queue.

Explore Rare Disases Similarities Based on literature until 2020 here

Instructions
PubSqueezer extracts publications from PubMed and squeezes out the most relevant information from them. It analyses abstracts and returns statistically relevant gene names, key phrases, MeSh terms, pathways, processes and more.
  • Give a name to you job
  • Write a query as you would do in PubMed
  • Click "Squeeze"

Data Science Analysis Tips
Pubsqueezer returns CSV files which can be parsed as vectors. Once you have feature vectors you can do any kind of analysis.
  • Simply compare common terms
  • Compute N vs N cross similarities using cosine similarity
  • Build complex netowrks
  • Train any machine learning algorithm


Analysed by Users
Knowledge is a free human heritage - sinnefa@gmail.com - Draft publication